Don't you just love the world of computers? Nothing ever works the way it's supposed to.
If it were me, I'd be looking for a loose UVCH (under valve cover harness) connector which would throw the P1316 code. Find the flat 9 pin wiring connector on the inboard side of each head. Then grab an ohm meter and check for resistance to see which valve cover(s) needs to be pulled.
The front 2 pins are glow plugs which should read less than 2 ohms when tested against a ground (this won't affect the rough running, but it's a good reference point)
the 3rd & 4th pin are injector wires and should read less than 5 ohms when tested against the 5th or center pin.
The 6th & 7th pin are the other 2 injectors on that side, and the last 2 pins are the remaining glow plugs.
If it were me, I'd be looking for a loose UVCH (under valve cover harness) connector which would throw the P1316 code. Find the flat 9 pin wiring connector on the inboard side of each head. Then grab an ohm meter and check for resistance to see which valve cover(s) needs to be pulled.
The front 2 pins are glow plugs which should read less than 2 ohms when tested against a ground (this won't affect the rough running, but it's a good reference point)
the 3rd & 4th pin are injector wires and should read less than 5 ohms when tested against the 5th or center pin.
The 6th & 7th pin are the other 2 injectors on that side, and the last 2 pins are the remaining glow plugs.